Institute for Airway Sciences

The Institute for Airway Sciences at the Icahn School of Medicine at Mount Sinai is a collaboration between physicians, scientists, and researchers who are dedicated to innovative research and transitioning science into clinical practice. With medical experts and clinical researchers from various disciplines all under the same roof, every project at the Institute is developed and studied under a multitude of unique scientific lenses.

Researchers at the Institute collaborate with multiple entities throughout the Mount Sinai Health System, including the Department of Otolaryngology-Head and Neck Surgery, Division of Pulmonary, Critical Care and Sleep Medicine, Department of Cell, Developmental, and Regenerative Biology, the Black Family Stem Cell Institute, and the Recanati/Miller Transplantation Institute. We organize seminars and research-in-progress talks focused on airway science and related diseases that affect the airway. To build a pipeline of innovative physician-scientists, pilot grants and scholarships are offered to medical students and residents in training.

Each system and structure of the airway—from the sinus cavities to the lungs—is linked and has a significant impact on each other. As a result, there is a pressing need for an initiative to better understand how the airway and epithelium respond to disease, injury, and environmental exposures. Together, our team of specialists work to address fundamentally important questions that further the field and make a difference in the lives of patients.

Research Areas

The COVID-19 pandemic brought the importance of establishing a multidisciplinary airway collaborative to the forefront. Most disease outbreaks, including COVID-19, swine flu, and avian influenza, are transmitted through the nose or mouth, and then impact the lungs. Understanding how respiratory viruses and bacteria spread is critical for developing strategies to prevent transmission. Our researchers are focusing on better understanding transmission routes, identifying factors that facilitate spread to new hosts, and determining ways to prevent viruses from entering the respiratory tract through measures like masks, improved ventilation, and nasal antivirals.

Lung transplantation poses considerable challenges in terms of quality, suitability, and patient outcomes. The majority of donated lungs are rejected due to minor injury or edema, with only 20 percent deemed suitable for transplantation. Moreover, approximately 40 percent of patients who undergo lung transplantation will experience rejection within the first year, and the five-year survival rate among all patients is estimated to be between 50 and 60 percent.

Our researchers at the Institute for Airway Sciences are investigating the potential of using human pluripotent cells to study the mechanisms of lung injury repair, cell-based therapy, disease modeling, and regenerative medicine. The research marks significant progress from traditional research on lung development, regeneration, and repair, which was conducted on mouse lungs. It also has the potential to reduce the risk of rejection among patients who undergo transplantation or to eliminate the requirement for transplantation. We are also exploring the potential of bioengineering the trachea using human pluripotent cells.

Human pluripotent stem cells (hPSC) are cells that have the potential to develop into any cell or tissue in the body. They include embryonic stem cells (ESCs) and induced pluripotent stem cells (iPSCs)–cells from an adult that have been reprogrammed back to stem cells. Similar to other stem cells, hPSCs are capable of self-renewal. Thus, stem-cell based therapy theoretically offers an opportunity to explore regenerative medicine.

Using directed differentiation—a bioengineering methodology in which pluripotent stem cells are given specific instructions through growth factors or small molecules—researchers are working to explore the potential of mimicking the necessary in vivo signaling in these cells to grow a lung from a donor’s pluripotent stem cells. If successful, it could virtually eliminate the complications traditionally associated with lung transplantation, such as rejection, or enable repair of rejected lungs to qualify for transplantation. It could also enable lung repair or the growth of a lung using a patient’s own hPSCs, resulting in more easily tolerated therapeutic approaches to traditional transplantation.

Our researchers are innovators in the field of hPSC, having developed the first human mini lung organoid model from human pluripotent cells. The lung organoid mimics aspects of the structure and respiratory composition of the human lung in vitro and in vivo. It offers a unique opportunity to explore the molecular mechanisms that initiate diseases such as COVID-19, influenza, measles, respiratory syncytial virus, and fibrosis within the lungs, and to conduct therapeutic screening to identify agents that have preventative or curative potential. Researchers are also using the lung organoid model to explore cell response to different viral or chemical insults and to hypoxia, and the mechanisms these phenomena trigger for repair.

Airway Regeneration
Airway damage is becoming more common due to increases in viruses, cancer, bacterial infections, and trauma. Our pulmonary team at Icahn Mount Sinai is dedicated to understanding how the lung epithelium is impacted by injury and the ways in which the organ and body work together to respond to injury, often through the repair and building of tissue. Researchers are employing a multifaceted approach, encompassing basic, translational, and clinical studies, to unravel the intricate processes that govern the development of epithelial tissues during embryonic development and their regenerative and repair capacities in adult life. The knowledge gained from these investigations is being leveraged to create innovative therapeutic strategies for treating disorders affecting epithelial tissues, including the airways and lungs.

Trachea Transplant Rejection
Tracheal transplantation is considered a vascularized composite allograft (VCA), which means it involves the transfer of a body part containing multiple tissue types from a donor to a recipient. Although VCA transplantation has changed the lives of thousands of patients, acute rejection occurs in approximately 80 percent of transplant recipients and chronic rejection occurs in approximately half. That rejection is triggered by epithelial cells in the airway.

Our researchers are attempting to create a tissue-engineered trachea from human pluripotent cells. We have pioneered a new way to use human pluripotent cells to generate and expand basal cells–the progenitor cells of the airway–to reconstruct the trachea’s epithelial cells and thus the trachea. This creates the potential to replace the trachea donor’s epithelial cells with those bioengineered from the recipient and thus reduce the risk of immune rejection or lower the requirement to administer immunosuppressants. It also creates the potential to eliminate the requirement for transplantation among certain patients through direct delivery of the therapeutic cells to the airway to effect injury repair.

To assess this potential, researchers create a bioengineered tracheal replacement and transplant it in mice to assess the cell’s ability to grow, differentiate, and support a fully functioning organ. If successful, it will be an optimal method to fuse these cells to the host tissues, resulting in a chimera that will prevent organ rejection, representing a significant advance in airway reconstruction. This research is funded by the United States Department of Defense and an anonymous philanthropic fund.

In early 2020, a new virus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) began spreading worldwide. Studies have revealed that the virus uses the TMPRSS2 protease and the ACE2 receptor to enter cells. Studies have also shown that ACE2 and TMPRSS2 are expressed in lung cells, thus leading to lung involvement.

Researchers at the Institute for Airway Sciences are using a lung organoid model to study the molecular mechanism by which SARS-CoV-2 enters the lungs and assess the potential of using TMPRSS2 antibodies to block that entry into lung cells, specifically lung alveolar type II cells, the progenitor cells of the distal lung. Researchers will first test whether TMPRSS2 antibodies are toxic to the lung cells they have grown. Once we have established a safe dosage for the antibodies, our team of physician-scientists will investigate the potential to block the virus and, if successful, whether that is achieved by reducing the amount of TMPRSS2 on the cell surface or blocking the function of TMPRSS2. Finally, we will transform the TMPRSS2 antibodies that can safely be used in humans and test their efficacy using lung organoids and animal models.

If successful, the research has the potential to deliver crucial insights into the mechanism whereby TMPRSS2 regulates SARS-CoV-2 entry and identify therapeutic candidates to impede that phenomenon. This could impact the lives of millions of people who have been affected by COVID-19 and other respiratory viruses, such as influenza A, that use TMPRSS2 to enter cells. In addition, since most of the coronavirus family heavily relies on TMPRSS2 to infect our lung cells, finding a way to block the function of TMPRSS2 could potentially protect us from the next coronavirus outbreak.

Otolaryngology Members

Ya-Wen Chen, PhD
Ya-Wen Chen, PhD
ASSOCIATE PROFESSOR | Otolaryngology
ASSOCIATE PROFESSOR | Pathology, Molecular and Cell Based Medicine
ASSOCIATE PROFESSOR | Cell, Developmental & Regenerative Biology
Mark S Courey, MD
Mark S Courey, MD
PROFESSOR | Otolaryngology
Umit Dasdogen, PhD
Umit Dasdogen, PhD
ASSISTANT PROFESSOR | Otolaryngology
Eric M Genden, MD
Eric M Genden, MD
PROFESSOR AND SYSTEM CHAIR | Otolaryngology
SENIOR ASSOCIATE DEAN FOR CLINICAL AFFAIRS
PROFESSOR | Neurosurgery
Satish Govindaraj, MD
Satish Govindaraj, MD
ASSOCIATE PROFESSOR | Otolaryngology
ASSOCIATE PROFESSOR | Neurosurgery
Alfred M.C. Iloreta, Jr., MD
Alfred M.C. Iloreta, Jr., MD
ASSISTANT PROFESSOR | Otolaryngology
ASSISTANT PROFESSOR | Neurosurgery
ASSISTANT PROFESSOR | Artificial Intelligence and Human Health
Benjamin Laitman, MD, PhD
Benjamin Laitman, MD, PhD
ASSISTANT PROFESSOR | Otolaryngology

Pulmonary Medicine Members

Udit S Chaddha, MBBS
Udit S Chaddha, MBBS
ASSOCIATE PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
ASSOCIATE PROFESSOR | Thoracic Surgery
Jaime Hook, MD
Jaime Hook, MD
ASSISTANT PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
ASSISTANT PROFESSOR | Microbiology
Jaymin Kathiriya, PhD
Jaymin Kathiriya, PhD
ASSISTANT PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
ASSISTANT PROFESSOR | Cell, Developmental & Regenerative Biology
Monica Kraft, MD
Monica Kraft, MD
PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
Patty J. Lee, MD
Patty J. Lee, MD
PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
Charles A Powell, MD, MBA
Charles A Powell, MD, MBA
DIRECTOR, MOUNT SINAI-NATIONAL JEWISH HEALTH RESPIRATORY INSTITUTE
PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
Hideo Watanabe, MD, PhD
Hideo Watanabe, MD, PhD
ASSOCIATE PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
ASSOCIATE PROFESSOR | Genetics and Genomic Sciences

Transplantation Members

Paolo Cravedi, MD
Paolo Cravedi, MD
ASSOCIATE PROFESSOR | Medicine, Nephrology
Sander S Florman, MD
Sander S Florman, MD
DIRECTOR RECANATI/MILLER TRANSPLANT INSTITUTE
PROFESSOR | Surgery
Amir Horowitz, PhD
Amir Horowitz, PhD
ASSOCIATE PROFESSOR | Immunology & Immunotherapy
ASSOCIATE PROFESSOR | Oncological Sciences
Daniel Laskey, MD
Daniel Laskey, MD
ASSISTANT PROFESSOR | Thoracic Surgery
Scott Scheinin, MD
Scott Scheinin, MD
PROFESSOR | Thoracic Surgery
Harish Seethamraju, MD
Harish Seethamraju, MD
PROFESSOR | Medicine, Pulmonary, Critical Care and Sleep Medicine
PROFESSOR | Cardiovascular Surgery

Genetics and Genomics Members

Alexander Tsankov, PhD
Alexander Tsankov, PhD
ASSISTANT PROFESSOR | Genetics and Genomic Sciences
ASSISTANT PROFESSOR | Immunology & Immunotherapy

Cell, Developmental, and Regenerative Biology Members

ALLISON MAY MILICIA
ALLISON MAY MILICIA
GRADUATE STUDENT | Graduate Students
FLEX STAFF - BY HOUR | Genetics and Genomic Sciences
Sarah Millar, PhD
Sarah Millar, PhD
DIRECTOR, BLACK FAMILY STEM CELL INSTITUTE
DIRECTOR, INSTITUTE FOR REGENERATIVE MEDICINE
DEAN FOR BASIC SCIENCE
PROFESSOR | Cell, Developmental & Regenerative Biology
PROFESSOR | Oncological Sciences
PROFESSOR | Dermatology
Michael Rendl, MD
Michael Rendl, MD
PROFESSOR | Cell, Developmental & Regenerative Biology
PROFESSOR | Dermatology
Elena Ezhkova, PhD
Elena Ezhkova, PhD
PROFESSOR | Cell, Developmental & Regenerative Biology
PROFESSOR | Dermatology
Zhe Ying, PhD
Zhe Ying, PhD
ASSISTANT PROFESSOR | Cell, Developmental & Regenerative Biology

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